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RNA Processing Programme

Research Group

Dr. Apostolia Guialis, Director of Research (Head)

Dr. Meropi Patrinou-Georgoula, Senior Research Scientist
Ms. Christina Theodoropoulou, Technician
Ms. Cleopatra Logotheti, Technician
Ms. Stavroula Tsouni, Technician

Dr. Michael Leichter
, Marie Curie Post-Doctoral Fellow
Ms Alexandra Platania, Diploma student of Biology
Mr Arsenios Vlasis, Diploma student of Biology
Ms Sofia katsibloula, Medical Doctor, external collaborator

Research objectives

The research activities of the program refer to the mechanisms underlying regulation of gene expression at the post-transcriptional level, in mammals. The focus has been on the role played by endogenous nuclear macromolecular assemblies containing protein components with RNA and/or DNA binding activity. A specific line of research is directed to the nuclear ribonucleoprotein (RNP) complexes with their associated group of hnRNP proteins, currently considered as important gene regulators, since in addition to their role in RNA processing are thought to coordinate biological functions operating at almost all levels of mRNA metabolism.

Research is conducted at two inter-connected levels:
I. Understanding basic regulatory processes of mRNA metabolism
II. Unraveling the nature and extent of participation of RNA processing components in human pathophysiology, in particular with respect to malignant transformation and autoimmunity.

Specific research activities under way refer to:
I a. Novel macromolecular assemblies involved in regulated gene expression: Structural/functional analysis of endogenous complexes involved in coupling transcription to RNA processing
I b. Molecular characterization of protein and RNA components belonging to nuclear ribonucleoprotein complexes
II a. The role played by members of the hnRNP protein family in the initiation and maintenance of malignant transformation
II b. hnRNP complexes as targets of autoantibodies in rheumatic autoimmune diseases.

Recent and Current Funding

European Union Funding
"Macromolecular assemblies involved in regulated gene expression: structural/functional characteristics, interplay and novel functions" Marie Curie Host Development for Transfer of Knowledge (TOK-Dev. 2004-2008) Coordinated by A. Guialis, RNA Processing Lab. and shared with A.. Pintzas, Signal Mediated Gene Expression Lab and MN Alexis, Molecular Endocrinology Lab. Total budget for IBRB: 852.832 euros; Lab budget: 284.280 euros

"Regulation of transcription and mRNA processing by oncogenic signals" Marie Curie Development Host Grant (2002-2005) Coordinated by A. Pintzas, Signal Mediated Gene Expression Lab and shared with A Guialis, RNA Processing Lab and MN Alexis, Molecular Endocrinology, IBRB, NHRF.
Total budget for IBRB: 228.000 euros; Lab budget: 76.000 euros

National Funding

"Investigating the presence of the transcription factor TAFII68 in novel macromolecular assemblies" Greek-French Bilateral collaboration grant (2001-2003). Dr. A. Guialis, IBRB, NHRF- Dr. L. Tora, CNRS, Strasbourg. Total Lab budget: 10.876 euros

" Development of new molecular, cellular and in vivo model systems to study mechanisms of pathogenesis, diagnosis and treatment of autoimmune diseases" National R&D grant (EKBAN-61, 1999-2001) coordinated by Prof. A.G. Tzioufas, Medical School , Univ. of Athens. Total Budget: 727.940 euros; Lab budget: 69.765 euros

"Development of new methods for prognosis and treatment of hormone-dependant neoplasia" National R&D grant (EKBAN-66, 1999-2001) coordinated by Prof . C.E. Sekeris, IBRB, NHRF. Total Budget for IBRB: 289.000 euros; Lab Budget: 44.400 euros.

Recent Publications

Molecular characterization of a murine, major A/B type hnRNP protein: mBx.
A. Plomaritoglou, T. Choli-Papadopoulou and A. Guialis.
Biochem. Biophys. Acta (2000) 1490, 5-62.

The 72/74 kDa polypeptides of the 70-110S large heterogeneous nuclear ribonucleoprotein complex (LH-nRNP) represent a discrete subset of the hnRNP M protein family.
P. Kafasla, M. Patrinou-Georgoula and A. Guialis.
Biochem. J. (2000) 363, 793-799.

No evidence of epitope spreading after immunization with the major Sm epitope P-P-G-M-R-P-P anchored to sequencial oligopeptide carriers (SOCs).
P.G. Vlachoyiannopoulos, C. Petrovas, A.G. Tzioufas, C. Alexopoulos,
V. Tsikaris, A. Guialis, L. Nakopoulou, C. Sakarellos-Daitsiotis, C.
Sakarelos, P. Davaris and H.M. Moutsopoulos
J. Autoimmun. (2000) 14, 53-61

Association of the 72/74kDa proteins, members of the heterogeneous nuclear ribonucleoprotein M group, with the pre-mRNA at early stages of spliceosome assembly.
P. Kafasla, M. Patrinou-Georgoula and A. Guialis.
Biochem. J. (2002) 363, 793-799.

Clinical, immunological, and immunogenetic aspects of autoantibody production against Ro/SSA, La/SSB and their linear epitopes in primary Sjogren's syndrome (pSS): a European multicentre study.
A.G. Tzioufas, R. Wassmuth, U.G. Dafni, A. Guialis, H.J. Haga, D.A. Isenberg, R. Jonsson, J.R. Kalden, H. Kiener, C. Sakarellos, J.S. Smolen, N. Sutcliffe, C. Vitali, E. Yiannaki and H.M. Moutsopoulos.
Ann. Rheum. Dis. (2002) 61, 398-404.

Nuclear actin is associated with a specific subset of hnRNP A/B - type proteins.
P. Percipalle, A. Jonsson, D. Nashchekin, C. Karlsson, T. Bergman, A.Guialis and B. Daneholt.
Nucl. Acids Res. (2002) 30, 1725-1734.

Functional Genomics approaches in the study of colorectal cancer.
M. Roberts, G. Vasiliou, A. Guialis, M.N. Alexis, and A. Pintzas
Eur. J. Biochem. (2003) Vol. 270 (sup 1) p. 24

Abstracts in recent scientific meetings

Identification of novel multi-factorial complexes of the specific transcription factor TAFII68 (TAF15)
A. Guialis, L. Tora, M. Patrinou-Georgoula
Workshop on "Coupling between transcription and RNA processing", Baeza, Spain, Nov. 8-10, 2004

Early detection of lung cancer: overexpression of hnRNP A2/B1 protein in bronchoscopic speciments
S. Katsimboula, M. Patrinou-Georgoula, A. Guialis, K. Dimakou and D. Orphanidou
14th European Respiratory Society Annual Congress, Glasgow, U.K. Sept. 4-8, 2004

 

 

 

   
       

 

   

Last Update: 13.09.2005
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